PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015899372.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 280aa    MW: 31071.5 Da    PI: 5.2075
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015899372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-183483255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_015899372.1 34 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 83
                    799******.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.4E-193491IPR016177DNA-binding domain
PROSITE profilePS5103219.5853491IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.1E-283491IPR001471AP2/ERF domain
SMARTSM003808.3E-363497IPR001471AP2/ERF domain
CDDcd000183.69E-323490No hitNo description
PfamPF008475.5E-133483IPR001471AP2/ERF domain
PRINTSPR003679.6E-83546IPR001471AP2/ERF domain
PRINTSPR003679.6E-85773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MEIQFQRPKD DPKSGIPTSR MGKFRGRSRN NTNKFVGVRQ RPSGRWVAEI KDTTQKIRMW  60
LGTFETAEEA ARAYDEAACL LRGSNTRTNF ITHVSMDSPL ASRIRNLLDS KKGTSKQKQI  120
VVEAPAPVTS STSKLVTNNA CTSTGTSSSS STGSDGANSN TSGIFQDTQF FDDAYKPDLS  180
NCNNDQEFEL TSSQSDLSWG GFGQGFDRFS FTQQVLDLPK NATTMTEAAD SEFLEFERMK  240
VERQISASLY AMNGVQEYME TVHDPTEALW DLPPLCSLLC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015899372.10.0PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLD7TI771e-124D7TI77_VITVI; Putative uncharacterized protein
STRINGVIT_08s0007g07250.t011e-124(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-30related to AP2 11